Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnrc6aQ3UHK8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnrc6aQ3UHK8 Gm43183-201ENSMUST00000200632 547 ntBASIC16.92■□□□□ 0.3
Tnrc6aQ3UHK8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnrc6aQ3UHK8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnrc6aQ3UHK8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Gm42545-201ENSMUST00000202755 922 ntBASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tnrc6aQ3UHK8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Mir6349-201ENSMUST00000184059 97 ntBASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Odf3b-204ENSMUST00000227834 930 ntBASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnrc6aQ3UHK8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Tnrc6aQ3UHK8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnrc6aQ3UHK8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.89■□□□□ 0.29
Tnrc6aQ3UHK8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnrc6aQ3UHK8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnrc6aQ3UHK8 Golph3-205ENSMUST00000228671 2842 ntBASIC16.89■□□□□ 0.29
Tnrc6aQ3UHK8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnrc6aQ3UHK8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Gm11539-201ENSMUST00000119837 557 ntBASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Gm13436-201ENSMUST00000120418 567 ntBASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Gm30025-201ENSMUST00000218555 728 ntBASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnrc6aQ3UHK8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Gm13559-201ENSMUST00000120476 863 ntBASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnrc6aQ3UHK8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tnrc6aQ3UHK8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms