Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Spg11Q3UHA3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Gm43575-201ENSMUST00000196420 516 ntBASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Spg11Q3UHA3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Spg11Q3UHA3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Spg11Q3UHA3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Spg11Q3UHA3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Spg11Q3UHA3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Spg11Q3UHA3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Spg11Q3UHA3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Gm11355-201ENSMUST00000121120 306 ntBASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Gm11452-201ENSMUST00000122376 690 ntBASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Spg11Q3UHA3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Spg11Q3UHA3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Spg11Q3UHA3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms