Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col5a2Q3U962 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col5a2Q3U962 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.74■■□□□ 1.07
Col5a2Q3U962 Gm2274-201ENSMUST00000184539 609 ntBASIC21.74■■□□□ 1.07
Col5a2Q3U962 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Col5a2Q3U962 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.74■■□□□ 1.07
Col5a2Q3U962 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Col5a2Q3U962 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col5a2Q3U962 Golph3-202ENSMUST00000226517 2359 ntBASIC21.74■■□□□ 1.07
Col5a2Q3U962 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Col5a2Q3U962 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col5a2Q3U962 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.73■■□□□ 1.07
Col5a2Q3U962 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col5a2Q3U962 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.73■■□□□ 1.07
Col5a2Q3U962 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col5a2Q3U962 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col5a2Q3U962 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col5a2Q3U962 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col5a2Q3U962 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col5a2Q3U962 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col5a2Q3U962 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col5a2Q3U962 Gm12085-201ENSMUST00000119263 940 ntBASIC21.72■■□□□ 1.07
Col5a2Q3U962 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.72■■□□□ 1.07
Col5a2Q3U962 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col5a2Q3U962 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col5a2Q3U962 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col5a2Q3U962 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col5a2Q3U962 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col5a2Q3U962 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col5a2Q3U962 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col5a2Q3U962 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col5a2Q3U962 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Col5a2Q3U962 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col5a2Q3U962 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col5a2Q3U962 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col5a2Q3U962 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col5a2Q3U962 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col5a2Q3U962 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.7■■□□□ 1.06
Col5a2Q3U962 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Gm25016-201ENSMUST00000158399 131 ntBASIC21.69■■□□□ 1.06
Col5a2Q3U962 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.69■■□□□ 1.06
Col5a2Q3U962 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a2Q3U962 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Col5a2Q3U962 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col5a2Q3U962 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Col5a2Q3U962 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col5a2Q3U962 Gm16061-201ENSMUST00000122167 857 ntBASIC21.68■■□□□ 1.06
Col5a2Q3U962 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col5a2Q3U962 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.68■■□□□ 1.06
Col5a2Q3U962 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col5a2Q3U962 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col5a2Q3U962 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.67■■□□□ 1.06
Col5a2Q3U962 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.67■■□□□ 1.06
Col5a2Q3U962 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Col5a2Q3U962 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Col5a2Q3U962 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.66■■□□□ 1.06
Col5a2Q3U962 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col5a2Q3U962 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col5a2Q3U962 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.65■■□□□ 1.06
Col5a2Q3U962 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms