Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nhej1Q3KNJ2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Tgds-204ENSMUST00000228543 1594 ntBASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhej1Q3KNJ2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nhej1Q3KNJ2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nhej1Q3KNJ2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Gm9988-201ENSMUST00000069786 435 ntBASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nhej1Q3KNJ2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 Gm13534-201ENSMUST00000121169 513 ntBASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.38■□□□□ 0.69
Nhej1Q3KNJ2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhej1Q3KNJ2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nhej1Q3KNJ2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Reep4-203ENSMUST00000226563 1444 ntBASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhej1Q3KNJ2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms