Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nell1Q2VWQ2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.77■□□□□ 0.44
Nell1Q2VWQ2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.77■□□□□ 0.44
Nell1Q2VWQ2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nell1Q2VWQ2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.77■□□□□ 0.44
Nell1Q2VWQ2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nell1Q2VWQ2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nell1Q2VWQ2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nell1Q2VWQ2 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.77■□□□□ 0.43
Nell1Q2VWQ2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nell1Q2VWQ2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nell1Q2VWQ2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nell1Q2VWQ2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nell1Q2VWQ2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nell1Q2VWQ2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nell1Q2VWQ2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nell1Q2VWQ2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Gm5417-201ENSMUST00000079706 384 ntBASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nell1Q2VWQ2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nell1Q2VWQ2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.73■□□□□ 0.43
Nell1Q2VWQ2 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Gm21814-202ENSMUST00000203277 873 ntBASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nell1Q2VWQ2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms