Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd8Q09XV5 Gm10052-201ENSMUST00000168019 960 ntBASIC16.38■□□□□ 0.21
Chd8Q09XV5 Gm7729-201ENSMUST00000050143 801 ntBASIC16.38■□□□□ 0.21
Chd8Q09XV5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.38■□□□□ 0.21
Chd8Q09XV5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Gm14822-201ENSMUST00000122247 291 ntBASIC16.38■□□□□ 0.21
Chd8Q09XV5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.38■□□□□ 0.21
Chd8Q09XV5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.38■□□□□ 0.21
Chd8Q09XV5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.38■□□□□ 0.21
Chd8Q09XV5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd8Q09XV5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Chd8Q09XV5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd8Q09XV5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd8Q09XV5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd8Q09XV5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd8Q09XV5 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.37■□□□□ 0.21
Chd8Q09XV5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd8Q09XV5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd8Q09XV5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd8Q09XV5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Gm24513-201ENSMUST00000174964 138 ntBASIC16.35■□□□□ 0.21
Chd8Q09XV5 Mir6349-201ENSMUST00000184059 97 ntBASIC16.35■□□□□ 0.21
Chd8Q09XV5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.35■□□□□ 0.21
Chd8Q09XV5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd8Q09XV5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd8Q09XV5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chd8Q09XV5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd8Q09XV5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Chd8Q09XV5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd8Q09XV5 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.33■□□□□ 0.2
Chd8Q09XV5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd8Q09XV5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.33■□□□□ 0.2
Chd8Q09XV5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.33■□□□□ 0.2
Chd8Q09XV5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd8Q09XV5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Chd8Q09XV5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Chd8Q09XV5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd8Q09XV5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd8Q09XV5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms