Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdx4Q07424 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdx4Q07424 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Cdx4Q07424 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdx4Q07424 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdx4Q07424 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.04□□□□□ -0.16
Cdx4Q07424 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdx4Q07424 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdx4Q07424 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdx4Q07424 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdx4Q07424 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdx4Q07424 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdx4Q07424 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdx4Q07424 Gm13146-201ENSMUST00000118508 780 ntBASIC14.03□□□□□ -0.16
Cdx4Q07424 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.03□□□□□ -0.16
Cdx4Q07424 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.03□□□□□ -0.16
Cdx4Q07424 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdx4Q07424 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdx4Q07424 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cdx4Q07424 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdx4Q07424 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdx4Q07424 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdx4Q07424 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdx4Q07424 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdx4Q07424 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cdx4Q07424 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cdx4Q07424 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdx4Q07424 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdx4Q07424 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdx4Q07424 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdx4Q07424 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdx4Q07424 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.02□□□□□ -0.17
Cdx4Q07424 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdx4Q07424 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdx4Q07424 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cdx4Q07424 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Cdx4Q07424 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdx4Q07424 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Cdx4Q07424 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdx4Q07424 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdx4Q07424 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdx4Q07424 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdx4Q07424 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdx4Q07424 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdx4Q07424 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Gm7290-201ENSMUST00000104990 617 ntBASIC14.01□□□□□ -0.17
Cdx4Q07424 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Gm12918-201ENSMUST00000120234 636 ntBASIC14.01□□□□□ -0.17
Cdx4Q07424 Gm15710-201ENSMUST00000121821 636 ntBASIC14.01□□□□□ -0.17
Cdx4Q07424 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdx4Q07424 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Gm5075-201ENSMUST00000196916 622 ntBASIC14.01□□□□□ -0.17
Cdx4Q07424 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.01□□□□□ -0.17
Cdx4Q07424 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.01□□□□□ -0.17
Cdx4Q07424 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.01□□□□□ -0.17
Cdx4Q07424 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.01□□□□□ -0.17
Cdx4Q07424 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx4Q07424 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdx4Q07424 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdx4Q07424 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Cdx4Q07424 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14□□□□□ -0.17
Cdx4Q07424 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Cdx4Q07424 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms