Protein–RNA interactions for Protein: P83917

Cbx1, Chromobox protein homolog 1, mousemouse

Known RBP Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1P83917 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cbx1P83917 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cbx1P83917 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cbx1P83917 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cbx1P83917 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cbx1P83917 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cbx1P83917 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cbx1P83917 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cbx1P83917 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Cbx1P83917 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx1P83917 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx1P83917 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx1P83917 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx1P83917 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx1P83917 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx1P83917 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx1P83917 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx1P83917 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx1P83917 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.41■□□□□ 0.7
Cbx1P83917 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cbx1P83917 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Cbx1P83917 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.4■□□□□ 0.7
Cbx1P83917 Mir6236-201ENSMUST00000184437 123 ntBASIC19.4■□□□□ 0.7
Cbx1P83917 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cbx1P83917 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx1P83917 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cbx1P83917 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cbx1P83917 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cbx1P83917 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cbx1P83917 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Cbx1P83917 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx1P83917 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx1P83917 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.39■□□□□ 0.69
Cbx1P83917 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx1P83917 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx1P83917 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cbx1P83917 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx1P83917 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx1P83917 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.39■□□□□ 0.69
Cbx1P83917 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cbx1P83917 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx1P83917 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.39■□□□□ 0.69
Cbx1P83917 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.38■□□□□ 0.69
Cbx1P83917 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.38■□□□□ 0.69
Cbx1P83917 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx1P83917 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Cbx1P83917 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Cbx1P83917 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx1P83917 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms