Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcbP82349 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SgcbP82349 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SgcbP82349 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcbP82349 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcbP82349 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcbP82349 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.23■□□□□ 0.19
SgcbP82349 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.23■□□□□ 0.19
SgcbP82349 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SgcbP82349 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.23■□□□□ 0.19
SgcbP82349 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SgcbP82349 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcbP82349 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SgcbP82349 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SgcbP82349 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SgcbP82349 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SgcbP82349 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.22■□□□□ 0.19
SgcbP82349 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.22■□□□□ 0.19
SgcbP82349 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.22■□□□□ 0.19
SgcbP82349 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SgcbP82349 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SgcbP82349 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcbP82349 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SgcbP82349 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcbP82349 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcbP82349 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SgcbP82349 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcbP82349 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SgcbP82349 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.21■□□□□ 0.19
SgcbP82349 Gm22325-201ENSMUST00000158904 308 ntBASIC16.21■□□□□ 0.19
SgcbP82349 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcbP82349 Gm44549-201ENSMUST00000208351 577 ntBASIC16.21■□□□□ 0.19
SgcbP82349 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcbP82349 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SgcbP82349 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcbP82349 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcbP82349 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcbP82349 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SgcbP82349 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SgcbP82349 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.2■□□□□ 0.18
SgcbP82349 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.2■□□□□ 0.18
SgcbP82349 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SgcbP82349 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SgcbP82349 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcbP82349 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SgcbP82349 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
SgcbP82349 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SgcbP82349 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SgcbP82349 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.19■□□□□ 0.18
SgcbP82349 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.19■□□□□ 0.18
SgcbP82349 Gm2559-201ENSMUST00000201323 363 ntBASIC16.19■□□□□ 0.18
SgcbP82349 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms