Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Traf6P70196 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.89■□□□□ 0.45
Traf6P70196 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Traf6P70196 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Traf6P70196 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Traf6P70196 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Traf6P70196 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Traf6P70196 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Traf6P70196 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.88■□□□□ 0.45
Traf6P70196 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Traf6P70196 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Traf6P70196 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Traf6P70196 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Traf6P70196 Gm5874-201ENSMUST00000096101 508 ntBASIC17.88■□□□□ 0.45
Traf6P70196 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Traf6P70196 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Traf6P70196 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Traf6P70196 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.88■□□□□ 0.45
Traf6P70196 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Traf6P70196 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Traf6P70196 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Traf6P70196 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf6P70196 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf6P70196 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Traf6P70196 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.87■□□□□ 0.45
Traf6P70196 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Traf6P70196 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.87■□□□□ 0.45
Traf6P70196 Gm13234-201ENSMUST00000120010 747 ntBASIC17.87■□□□□ 0.45
Traf6P70196 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.87■□□□□ 0.45
Traf6P70196 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.87■□□□□ 0.45
Traf6P70196 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf6P70196 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf6P70196 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf6P70196 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf6P70196 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Traf6P70196 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf6P70196 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.86■□□□□ 0.45
Traf6P70196 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf6P70196 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
Traf6P70196 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf6P70196 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.86■□□□□ 0.45
Traf6P70196 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf6P70196 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf6P70196 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf6P70196 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf6P70196 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Traf6P70196 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf6P70196 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Traf6P70196 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf6P70196 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Traf6P70196 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.85■□□□□ 0.45
Traf6P70196 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.85■□□□□ 0.45
Traf6P70196 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.85■□□□□ 0.45
Traf6P70196 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Traf6P70196 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf6P70196 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.85■□□□□ 0.45
Traf6P70196 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf6P70196 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Traf6P70196 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf6P70196 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf6P70196 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Traf6P70196 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf6P70196 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Traf6P70196 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Traf6P70196 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.84■□□□□ 0.45
Traf6P70196 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.84■□□□□ 0.45
Traf6P70196 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.84■□□□□ 0.45
Traf6P70196 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf6P70196 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Traf6P70196 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Traf6P70196 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Traf6P70196 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Traf6P70196 Gm10493-201ENSMUST00000097270 612 ntBASIC17.83■□□□□ 0.44
Traf6P70196 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Traf6P70196 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Traf6P70196 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Traf6P70196 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Traf6P70196 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Traf6P70196 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Traf6P70196 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms