Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.98□□□□□ -0.33
Rpl39P62892 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Gm5812-201ENSMUST00000061073 957 ntBASIC12.98□□□□□ -0.33
Rpl39P62892 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rpl39P62892 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rpl39P62892 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.98□□□□□ -0.33
Rpl39P62892 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rpl39P62892 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpl39P62892 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpl39P62892 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.97□□□□□ -0.33
Rpl39P62892 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpl39P62892 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Rpl39P62892 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.97□□□□□ -0.33
Rpl39P62892 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rpl39P62892 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpl39P62892 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Rpl39P62892 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rpl39P62892 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rpl39P62892 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Rpl39P62892 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl39P62892 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rpl39P62892 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Rpl39P62892 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpl39P62892 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpl39P62892 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rpl39P62892 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Rpl39P62892 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.96□□□□□ -0.33
Rpl39P62892 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl39P62892 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpl39P62892 Golgb1-201ENSMUST00000023534 498 ntBASIC12.96□□□□□ -0.33
Rpl39P62892 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpl39P62892 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Rpl39P62892 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpl39P62892 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.96□□□□□ -0.34
Rpl39P62892 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpl39P62892 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rpl39P62892 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.95□□□□□ -0.34
Rpl39P62892 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rpl39P62892 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.95□□□□□ -0.34
Rpl39P62892 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.95□□□□□ -0.34
Rpl39P62892 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rpl39P62892 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rpl39P62892 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl39P62892 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rpl39P62892 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms