Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm3P62311 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm3P62311 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm3P62311 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm3P62311 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.64■□□□□ 0.25
Lsm3P62311 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm3P62311 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm3P62311 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm3P62311 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.63■□□□□ 0.25
Lsm3P62311 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Lsm3P62311 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.63■□□□□ 0.25
Lsm3P62311 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lsm3P62311 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lsm3P62311 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm3P62311 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm3P62311 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm3P62311 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm3P62311 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.62■□□□□ 0.25
Lsm3P62311 Serp2-204ENSMUST00000228055 705 ntBASIC16.62■□□□□ 0.25
Lsm3P62311 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm3P62311 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm3P62311 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm3P62311 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm3P62311 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm3P62311 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Lsm3P62311 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.61■□□□□ 0.25
Lsm3P62311 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.61■□□□□ 0.25
Lsm3P62311 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Lsm3P62311 Gm40881-201ENSMUST00000223397 166 ntBASIC16.61■□□□□ 0.25
Lsm3P62311 Gm10232-201ENSMUST00000089221 720 ntBASIC16.61■□□□□ 0.25
Lsm3P62311 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm3P62311 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lsm3P62311 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.6■□□□□ 0.25
Lsm3P62311 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.6■□□□□ 0.25
Lsm3P62311 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.6■□□□□ 0.25
Lsm3P62311 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.6■□□□□ 0.25
Lsm3P62311 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm3P62311 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.6■□□□□ 0.25
Lsm3P62311 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.6■□□□□ 0.25
Lsm3P62311 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lsm3P62311 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Lsm3P62311 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm3P62311 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Lsm3P62311 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms