Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 BC021767-201ENSMUST00000126387 1716 ntBASIC15.34■□□□□ 0.05
Cpne2P59108 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Cpne2P59108 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cpne2P59108 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpne2P59108 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpne2P59108 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpne2P59108 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpne2P59108 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpne2P59108 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpne2P59108 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Gm21956-201ENSMUST00000179946 522 ntBASIC15.33■□□□□ 0.04
Cpne2P59108 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.33■□□□□ 0.04
Cpne2P59108 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.33■□□□□ 0.04
Cpne2P59108 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpne2P59108 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cpne2P59108 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cpne2P59108 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.32■□□□□ 0.04
Cpne2P59108 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.32■□□□□ 0.04
Cpne2P59108 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cpne2P59108 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cpne2P59108 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cpne2P59108 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne2P59108 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cpne2P59108 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cpne2P59108 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Cpne2P59108 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.31■□□□□ 0.04
Cpne2P59108 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cpne2P59108 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne2P59108 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.31■□□□□ 0.04
Cpne2P59108 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.31■□□□□ 0.04
Cpne2P59108 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cpne2P59108 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cpne2P59108 Gm12251-201ENSMUST00000117893 792 ntBASIC15.3■□□□□ 0.04
Cpne2P59108 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.3■□□□□ 0.04
Cpne2P59108 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Cpne2P59108 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.3■□□□□ 0.04
Cpne2P59108 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.3■□□□□ 0.04
Cpne2P59108 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.3■□□□□ 0.04
Cpne2P59108 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne2P59108 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne2P59108 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne2P59108 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cpne2P59108 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cpne2P59108 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms