Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctdsp1P58466 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctdsp1P58466 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctdsp1P58466 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdsp1P58466 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ctdsp1P58466 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdsp1P58466 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.27□□□□□ -0.12
Ctdsp1P58466 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.27□□□□□ -0.12
Ctdsp1P58466 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdsp1P58466 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.27□□□□□ -0.12
Ctdsp1P58466 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdsp1P58466 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.26□□□□□ -0.13
Ctdsp1P58466 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Gm43530-201ENSMUST00000195920 274 ntBASIC14.26□□□□□ -0.13
Ctdsp1P58466 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.26□□□□□ -0.13
Ctdsp1P58466 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdsp1P58466 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdsp1P58466 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.25□□□□□ -0.13
Ctdsp1P58466 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdsp1P58466 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdsp1P58466 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Ctdsp1P58466 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdsp1P58466 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms