Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Sssca1P56873 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Sssca1P56873 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sssca1P56873 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Sssca1P56873 Gm13241-201ENSMUST00000094493 780 ntBASIC14.7□□□□□ -0.06
Sssca1P56873 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.7□□□□□ -0.06
Sssca1P56873 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sssca1P56873 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sssca1P56873 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sssca1P56873 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.69□□□□□ -0.06
Sssca1P56873 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sssca1P56873 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sssca1P56873 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sssca1P56873 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Sssca1P56873 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sssca1P56873 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.69□□□□□ -0.06
Sssca1P56873 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sssca1P56873 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Sssca1P56873 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sssca1P56873 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Sssca1P56873 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.68□□□□□ -0.06
Sssca1P56873 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.68□□□□□ -0.06
Sssca1P56873 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.68□□□□□ -0.06
Sssca1P56873 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Sssca1P56873 Gm43173-201ENSMUST00000202246 593 ntBASIC14.68□□□□□ -0.06
Sssca1P56873 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Sssca1P56873 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sssca1P56873 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sssca1P56873 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sssca1P56873 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sssca1P56873 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.67□□□□□ -0.06
Sssca1P56873 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.67□□□□□ -0.06
Sssca1P56873 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sssca1P56873 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sssca1P56873 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sssca1P56873 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sssca1P56873 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sssca1P56873 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.66□□□□□ -0.06
Sssca1P56873 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms