Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.38□□□□□ -0.11
Rab4aP56371 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.38□□□□□ -0.11
Rab4aP56371 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rab4aP56371 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rab4aP56371 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.37□□□□□ -0.11
Rab4aP56371 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.37□□□□□ -0.11
Rab4aP56371 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.37□□□□□ -0.11
Rab4aP56371 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.37□□□□□ -0.11
Rab4aP56371 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rab4aP56371 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rab4aP56371 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.36□□□□□ -0.11
Rab4aP56371 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.36□□□□□ -0.11
Rab4aP56371 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rab4aP56371 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.36□□□□□ -0.11
Rab4aP56371 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.36□□□□□ -0.11
Rab4aP56371 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab4aP56371 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rab4aP56371 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rab4aP56371 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rab4aP56371 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.35□□□□□ -0.11
Rab4aP56371 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rab4aP56371 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.35□□□□□ -0.11
Rab4aP56371 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Rab4aP56371 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rab4aP56371 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab4aP56371 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.34□□□□□ -0.11
Rab4aP56371 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.34□□□□□ -0.11
Rab4aP56371 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.34□□□□□ -0.11
Rab4aP56371 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms