Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cdh11P55288 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Cdh11P55288 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cdh11P55288 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.57■□□□□ 0.24
Cdh11P55288 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.57■□□□□ 0.24
Cdh11P55288 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cdh11P55288 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.56■□□□□ 0.24
Cdh11P55288 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.56■□□□□ 0.24
Cdh11P55288 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cdh11P55288 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh11P55288 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Cdh11P55288 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cdh11P55288 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Cdh11P55288 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdh11P55288 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.55■□□□□ 0.24
Cdh11P55288 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.55■□□□□ 0.24
Cdh11P55288 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh11P55288 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cdh11P55288 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cdh11P55288 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.54■□□□□ 0.24
Cdh11P55288 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.54■□□□□ 0.24
Cdh11P55288 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdh11P55288 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.54■□□□□ 0.24
Cdh11P55288 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.54■□□□□ 0.24
Cdh11P55288 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdh11P55288 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdh11P55288 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdh11P55288 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.54■□□□□ 0.24
Cdh11P55288 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Cdh11P55288 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh11P55288 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cdh11P55288 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cdh11P55288 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.53■□□□□ 0.24
Cdh11P55288 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh11P55288 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh11P55288 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh11P55288 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh11P55288 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh11P55288 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh11P55288 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh11P55288 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh11P55288 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh11P55288 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh11P55288 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.51■□□□□ 0.23
Cdh11P55288 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.51■□□□□ 0.23
Cdh11P55288 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms