Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NcanP55066 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.3■□□□□ 0.68
NcanP55066 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NcanP55066 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NcanP55066 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NcanP55066 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NcanP55066 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NcanP55066 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.29■□□□□ 0.68
NcanP55066 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NcanP55066 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NcanP55066 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NcanP55066 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NcanP55066 Mir2861-201ENSMUST00000175539 82 ntBASIC19.29■□□□□ 0.68
NcanP55066 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.29■□□□□ 0.68
NcanP55066 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.29■□□□□ 0.68
NcanP55066 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.29■□□□□ 0.68
NcanP55066 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NcanP55066 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NcanP55066 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NcanP55066 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NcanP55066 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NcanP55066 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.28■□□□□ 0.68
NcanP55066 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.28■□□□□ 0.68
NcanP55066 Gm5587-201ENSMUST00000206270 674 ntBASIC19.28■□□□□ 0.68
NcanP55066 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.28■□□□□ 0.68
NcanP55066 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NcanP55066 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.28■□□□□ 0.68
NcanP55066 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NcanP55066 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.28■□□□□ 0.68
NcanP55066 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NcanP55066 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NcanP55066 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NcanP55066 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NcanP55066 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NcanP55066 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NcanP55066 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NcanP55066 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NcanP55066 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NcanP55066 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NcanP55066 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.26■□□□□ 0.67
NcanP55066 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.26■□□□□ 0.67
NcanP55066 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.26■□□□□ 0.67
NcanP55066 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.26■□□□□ 0.67
NcanP55066 Gm21559-201ENSMUST00000220638 855 ntBASIC19.26■□□□□ 0.67
NcanP55066 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NcanP55066 Gm8587-201ENSMUST00000076538 843 ntBASIC19.26■□□□□ 0.67
NcanP55066 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NcanP55066 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NcanP55066 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NcanP55066 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NcanP55066 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NcanP55066 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NcanP55066 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.25■□□□□ 0.67
NcanP55066 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NcanP55066 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.25■□□□□ 0.67
NcanP55066 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.25■□□□□ 0.67
NcanP55066 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 Gm5186-201ENSMUST00000218781 920 ntBASIC19.25■□□□□ 0.67
NcanP55066 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.25■□□□□ 0.67
NcanP55066 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NcanP55066 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcanP55066 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NcanP55066 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcanP55066 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NcanP55066 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcanP55066 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.24■□□□□ 0.67
NcanP55066 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.24■□□□□ 0.67
NcanP55066 Gm17808-201ENSMUST00000200859 894 ntBASIC19.24■□□□□ 0.67
NcanP55066 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcanP55066 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcanP55066 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
NcanP55066 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcanP55066 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcanP55066 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NcanP55066 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.23■□□□□ 0.67
NcanP55066 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.23■□□□□ 0.67
NcanP55066 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcanP55066 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
NcanP55066 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Gm16061-201ENSMUST00000122167 857 ntBASIC19.22■□□□□ 0.67
NcanP55066 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms