Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.25■□□□□ 0.83
Nek1P51954 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Gm13534-201ENSMUST00000121169 513 ntBASIC20.25■□□□□ 0.83
Nek1P51954 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.25■□□□□ 0.83
Nek1P51954 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.25■□□□□ 0.83
Nek1P51954 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nek1P51954 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.25■□□□□ 0.83
Nek1P51954 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek1P51954 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek1P51954 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek1P51954 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.24■□□□□ 0.83
Nek1P51954 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek1P51954 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek1P51954 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek1P51954 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek1P51954 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Nek1P51954 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek1P51954 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nek1P51954 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nek1P51954 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek1P51954 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.22■□□□□ 0.83
Nek1P51954 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nek1P51954 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Nek1P51954 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nek1P51954 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.21■□□□□ 0.83
Nek1P51954 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek1P51954 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Nek1P51954 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.2■□□□□ 0.82
Nek1P51954 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek1P51954 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek1P51954 Mir5133-201ENSMUST00000174955 77 ntBASIC20.2■□□□□ 0.82
Nek1P51954 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek1P51954 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek1P51954 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek1P51954 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nek1P51954 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek1P51954 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.19■□□□□ 0.82
Nek1P51954 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Nek1P51954 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nek1P51954 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nek1P51954 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.19■□□□□ 0.82
Nek1P51954 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek1P51954 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek1P51954 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.18■□□□□ 0.82
Nek1P51954 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nek1P51954 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek1P51954 Nespas-201ENSMUST00000143738 1083 ntBASIC20.18■□□□□ 0.82
Nek1P51954 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nek1P51954 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms