Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.86■□□□□ 0.29
Ccr4P51680 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.86■□□□□ 0.29
Ccr4P51680 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccr4P51680 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccr4P51680 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccr4P51680 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccr4P51680 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ccr4P51680 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ccr4P51680 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccr4P51680 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccr4P51680 Nespas-201ENSMUST00000143738 1083 ntBASIC16.85■□□□□ 0.29
Ccr4P51680 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
Ccr4P51680 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccr4P51680 Gm7514-201ENSMUST00000209475 934 ntBASIC16.85■□□□□ 0.29
Ccr4P51680 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccr4P51680 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.85■□□□□ 0.29
Ccr4P51680 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccr4P51680 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccr4P51680 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ccr4P51680 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccr4P51680 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ccr4P51680 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccr4P51680 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.84■□□□□ 0.29
Ccr4P51680 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ccr4P51680 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Gm6420-201ENSMUST00000193885 723 ntBASIC16.84■□□□□ 0.29
Ccr4P51680 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccr4P51680 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccr4P51680 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ccr4P51680 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ccr4P51680 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccr4P51680 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.83■□□□□ 0.28
Ccr4P51680 Gm10033-202ENSMUST00000211874 928 ntBASIC16.83■□□□□ 0.28
Ccr4P51680 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccr4P51680 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Ccr4P51680 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccr4P51680 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccr4P51680 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.82■□□□□ 0.28
Ccr4P51680 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccr4P51680 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccr4P51680 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccr4P51680 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccr4P51680 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ccr4P51680 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccr4P51680 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ccr4P51680 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ccr4P51680 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
Ccr4P51680 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccr4P51680 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms