Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rfx3P48381 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.45■□□□□ 0.22
Rfx3P48381 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rfx3P48381 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rfx3P48381 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.44■□□□□ 0.22
Rfx3P48381 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.44■□□□□ 0.22
Rfx3P48381 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Rfx3P48381 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx3P48381 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rfx3P48381 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rfx3P48381 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfx3P48381 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Reep4-203ENSMUST00000226563 1444 ntBASIC16.43■□□□□ 0.22
Rfx3P48381 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx3P48381 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rfx3P48381 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.42■□□□□ 0.22
Rfx3P48381 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.42■□□□□ 0.22
Rfx3P48381 Gm8495-201ENSMUST00000188740 694 ntBASIC16.42■□□□□ 0.22
Rfx3P48381 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx3P48381 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.41■□□□□ 0.22
Rfx3P48381 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.41■□□□□ 0.22
Rfx3P48381 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Rfx3P48381 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx3P48381 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rfx3P48381 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rfx3P48381 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfx3P48381 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.4■□□□□ 0.22
Rfx3P48381 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Rfx3P48381 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.4■□□□□ 0.22
Rfx3P48381 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Rfx3P48381 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rfx3P48381 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
Rfx3P48381 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.4■□□□□ 0.22
Rfx3P48381 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx3P48381 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms