Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.42■□□□□ 0.06
Hist1h1dP43277 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.42■□□□□ 0.06
Hist1h1dP43277 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.42■□□□□ 0.06
Hist1h1dP43277 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1dP43277 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Gm12821-201ENSMUST00000120022 600 ntBASIC15.41■□□□□ 0.06
Hist1h1dP43277 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.41■□□□□ 0.06
Hist1h1dP43277 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Hist1h1dP43277 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.4■□□□□ 0.06
Hist1h1dP43277 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.4■□□□□ 0.06
Hist1h1dP43277 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1dP43277 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Gm6139-201ENSMUST00000079261 882 ntBASIC15.39■□□□□ 0.05
Hist1h1dP43277 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hist1h1dP43277 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1dP43277 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.38■□□□□ 0.05
Hist1h1dP43277 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Tgds-204ENSMUST00000228543 1594 ntBASIC15.38■□□□□ 0.05
Hist1h1dP43277 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1dP43277 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms