Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Abca1P41233 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Abca1P41233 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Gm10231-201ENSMUST00000181584 441 ntBASIC15.04■□□□□ -0
Abca1P41233 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Gm10175-202ENSMUST00000208752 441 ntBASIC15.04■□□□□ -0
Abca1P41233 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Abca1P41233 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.04■□□□□ -0
Abca1P41233 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.03■□□□□ -0
Abca1P41233 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.03■□□□□ -0
Abca1P41233 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Abca1P41233 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Abca1P41233 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.03■□□□□ -0
Abca1P41233 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.03■□□□□ -0
Abca1P41233 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abca1P41233 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Abca1P41233 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Abca1P41233 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Abca1P41233 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.02□□□□□ -0.01
Abca1P41233 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Abca1P41233 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca1P41233 Golph3-205ENSMUST00000228671 2842 ntBASIC15.01□□□□□ -0.01
Abca1P41233 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Abca1P41233 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.01□□□□□ -0.01
Abca1P41233 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
Abca1P41233 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.01□□□□□ -0.01
Abca1P41233 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.01□□□□□ -0.01
Abca1P41233 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.01□□□□□ -0.01
Abca1P41233 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca1P41233 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms