Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox6P40645 Gm5874-201ENSMUST00000096101 508 ntBASIC17.08■□□□□ 0.32
Sox6P40645 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox6P40645 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox6P40645 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox6P40645 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sox6P40645 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sox6P40645 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Gm18284-201ENSMUST00000172604 624 ntBASIC17.07■□□□□ 0.32
Sox6P40645 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.07■□□□□ 0.32
Sox6P40645 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Sox6P40645 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.07■□□□□ 0.32
Sox6P40645 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox6P40645 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sox6P40645 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.06■□□□□ 0.32
Sox6P40645 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sox6P40645 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.06■□□□□ 0.32
Sox6P40645 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.06■□□□□ 0.32
Sox6P40645 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Sox6P40645 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox6P40645 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.06■□□□□ 0.32
Sox6P40645 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.05■□□□□ 0.32
Sox6P40645 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox6P40645 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.05■□□□□ 0.32
Sox6P40645 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.05■□□□□ 0.32
Sox6P40645 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox6P40645 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox6P40645 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox6P40645 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.05■□□□□ 0.32
Sox6P40645 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox6P40645 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sox6P40645 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sox6P40645 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox6P40645 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.04■□□□□ 0.32
Sox6P40645 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sox6P40645 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.04■□□□□ 0.32
Sox6P40645 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.04■□□□□ 0.32
Sox6P40645 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox6P40645 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
Sox6P40645 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.03■□□□□ 0.32
Sox6P40645 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 Gm7860-201ENSMUST00000121190 879 ntBASIC17.03■□□□□ 0.32
Sox6P40645 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Sox6P40645 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox6P40645 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.03■□□□□ 0.32
Sox6P40645 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox6P40645 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms