Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Foxa1P35582 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxa1P35582 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.82■□□□□ 0.28
Foxa1P35582 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxa1P35582 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Foxa1P35582 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxa1P35582 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Foxa1P35582 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.82■□□□□ 0.28
Foxa1P35582 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Foxa1P35582 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.82■□□□□ 0.28
Foxa1P35582 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxa1P35582 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxa1P35582 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Foxa1P35582 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxa1P35582 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.82■□□□□ 0.28
Foxa1P35582 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Foxa1P35582 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Foxa1P35582 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxa1P35582 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxa1P35582 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.81■□□□□ 0.28
Foxa1P35582 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.81■□□□□ 0.28
Foxa1P35582 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxa1P35582 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Foxa1P35582 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Foxa1P35582 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxa1P35582 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxa1P35582 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxa1P35582 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Foxa1P35582 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxa1P35582 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Foxa1P35582 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxa1P35582 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Foxa1P35582 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxa1P35582 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxa1P35582 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxa1P35582 Gm44549-201ENSMUST00000208351 577 ntBASIC16.8■□□□□ 0.28
Foxa1P35582 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.8■□□□□ 0.28
Foxa1P35582 Gm4968-201ENSMUST00000071458 858 ntBASIC16.8■□□□□ 0.28
Foxa1P35582 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxa1P35582 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxa1P35582 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxa1P35582 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.8■□□□□ 0.28
Foxa1P35582 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Foxa1P35582 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.79■□□□□ 0.28
Foxa1P35582 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.79■□□□□ 0.28
Foxa1P35582 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.79■□□□□ 0.28
Foxa1P35582 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.79■□□□□ 0.28
Foxa1P35582 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Foxa1P35582 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Foxa1P35582 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Foxa1P35582 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.78■□□□□ 0.28
Foxa1P35582 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Foxa1P35582 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Foxa1P35582 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Foxa1P35582 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.78■□□□□ 0.28
Foxa1P35582 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.78■□□□□ 0.28
Foxa1P35582 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.78■□□□□ 0.28
Foxa1P35582 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Foxa1P35582 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Foxa1P35582 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Foxa1P35582 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxa1P35582 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxa1P35582 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.77■□□□□ 0.28
Foxa1P35582 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxa1P35582 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxa1P35582 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxa1P35582 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxa1P35582 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Foxa1P35582 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.77■□□□□ 0.28
Foxa1P35582 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Foxa1P35582 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.77■□□□□ 0.28
Foxa1P35582 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Foxa1P35582 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Foxa1P35582 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxa1P35582 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxa1P35582 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Foxa1P35582 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.77■□□□□ 0.27
Foxa1P35582 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Foxa1P35582 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Gm2399-201ENSMUST00000104944 225 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms