Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.81■□□□□ 0.28
Thbs1P35441 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.81■□□□□ 0.28
Thbs1P35441 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.81■□□□□ 0.28
Thbs1P35441 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thbs1P35441 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thbs1P35441 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thbs1P35441 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Thbs1P35441 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Thbs1P35441 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Thbs1P35441 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.8■□□□□ 0.28
Thbs1P35441 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thbs1P35441 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thbs1P35441 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thbs1P35441 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Thbs1P35441 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thbs1P35441 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Thbs1P35441 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
Thbs1P35441 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Thbs1P35441 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Thbs1P35441 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.79■□□□□ 0.28
Thbs1P35441 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thbs1P35441 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.78■□□□□ 0.28
Thbs1P35441 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.78■□□□□ 0.28
Thbs1P35441 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Thbs1P35441 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.78■□□□□ 0.28
Thbs1P35441 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.78■□□□□ 0.28
Thbs1P35441 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.78■□□□□ 0.28
Thbs1P35441 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Thbs1P35441 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.78■□□□□ 0.28
Thbs1P35441 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Thbs1P35441 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thbs1P35441 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Thbs1P35441 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.77■□□□□ 0.28
Thbs1P35441 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Thbs1P35441 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thbs1P35441 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thbs1P35441 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Thbs1P35441 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Thbs1P35441 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.77■□□□□ 0.28
Thbs1P35441 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.77■□□□□ 0.28
Thbs1P35441 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Thbs1P35441 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Thbs1P35441 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thbs1P35441 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thbs1P35441 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
Thbs1P35441 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thbs1P35441 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thbs1P35441 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Thbs1P35441 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thbs1P35441 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thbs1P35441 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Thbs1P35441 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thbs1P35441 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thbs1P35441 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.76■□□□□ 0.27
Thbs1P35441 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.76■□□□□ 0.27
Thbs1P35441 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Thbs1P35441 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thbs1P35441 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thbs1P35441 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.76■□□□□ 0.27
Thbs1P35441 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.76■□□□□ 0.27
Thbs1P35441 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Thbs1P35441 Fst-202ENSMUST00000223640 2612 ntBASIC16.75■□□□□ 0.27
Thbs1P35441 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thbs1P35441 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.75■□□□□ 0.27
Thbs1P35441 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms