Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cbx3P23198 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cbx3P23198 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.55■□□□□ 0.24
Cbx3P23198 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.55■□□□□ 0.24
Cbx3P23198 Gm40881-201ENSMUST00000223397 166 ntBASIC16.55■□□□□ 0.24
Cbx3P23198 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Cbx3P23198 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cbx3P23198 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cbx3P23198 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.54■□□□□ 0.24
Cbx3P23198 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cbx3P23198 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cbx3P23198 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cbx3P23198 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cbx3P23198 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.54■□□□□ 0.24
Cbx3P23198 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cbx3P23198 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.53■□□□□ 0.24
Cbx3P23198 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cbx3P23198 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cbx3P23198 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cbx3P23198 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cbx3P23198 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.52■□□□□ 0.24
Cbx3P23198 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.52■□□□□ 0.24
Cbx3P23198 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.52■□□□□ 0.24
Cbx3P23198 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cbx3P23198 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cbx3P23198 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cbx3P23198 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cbx3P23198 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cbx3P23198 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cbx3P23198 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.52■□□□□ 0.23
Cbx3P23198 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cbx3P23198 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Cbx3P23198 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.51■□□□□ 0.23
Cbx3P23198 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.51■□□□□ 0.23
Cbx3P23198 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.51■□□□□ 0.23
Cbx3P23198 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Cbx3P23198 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cbx3P23198 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cbx3P23198 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cbx3P23198 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.5■□□□□ 0.23
Cbx3P23198 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cbx3P23198 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cbx3P23198 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.5■□□□□ 0.23
Cbx3P23198 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cbx3P23198 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Cbx3P23198 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cbx3P23198 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cbx3P23198 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cbx3P23198 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cbx3P23198 Gm15820-201ENSMUST00000201566 728 ntBASIC16.5■□□□□ 0.23
Cbx3P23198 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.5■□□□□ 0.23
Cbx3P23198 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cbx3P23198 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cbx3P23198 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms