Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Hoxa1P09022 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxa1P09022 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Hoxa1P09022 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxa1P09022 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.85□□□□□ -0.03
Hoxa1P09022 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxa1P09022 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxa1P09022 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.85□□□□□ -0.03
Hoxa1P09022 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.84□□□□□ -0.03
Hoxa1P09022 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.84□□□□□ -0.03
Hoxa1P09022 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.84□□□□□ -0.03
Hoxa1P09022 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Hoxa1P09022 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.84□□□□□ -0.03
Hoxa1P09022 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.84□□□□□ -0.03
Hoxa1P09022 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Hoxa1P09022 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxa1P09022 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.83□□□□□ -0.03
Hoxa1P09022 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.83□□□□□ -0.03
Hoxa1P09022 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.83□□□□□ -0.03
Hoxa1P09022 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxa1P09022 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxa1P09022 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxa1P09022 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxa1P09022 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa1P09022 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.83□□□□□ -0.04
Hoxa1P09022 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.83□□□□□ -0.04
Hoxa1P09022 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.83□□□□□ -0.04
Hoxa1P09022 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa1P09022 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa1P09022 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Hoxa1P09022 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa1P09022 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa1P09022 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa1P09022 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa1P09022 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa1P09022 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.83□□□□□ -0.04
Hoxa1P09022 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxa1P09022 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hoxa1P09022 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxa1P09022 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.82□□□□□ -0.04
Hoxa1P09022 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.82□□□□□ -0.04
Hoxa1P09022 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxa1P09022 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.82□□□□□ -0.04
Hoxa1P09022 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa1P09022 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxa1P09022 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.81□□□□□ -0.04
Hoxa1P09022 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.81□□□□□ -0.04
Hoxa1P09022 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 Gm9988-201ENSMUST00000069786 435 ntBASIC14.81□□□□□ -0.04
Hoxa1P09022 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa1P09022 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.81□□□□□ -0.04
Hoxa1P09022 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms