Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.33■□□□□ 0.68
TnfP06804 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TnfP06804 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TnfP06804 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TnfP06804 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TnfP06804 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TnfP06804 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.33■□□□□ 0.68
TnfP06804 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnfP06804 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnfP06804 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnfP06804 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnfP06804 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnfP06804 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnfP06804 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TnfP06804 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.32■□□□□ 0.68
TnfP06804 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnfP06804 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnfP06804 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TnfP06804 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TnfP06804 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TnfP06804 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TnfP06804 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TnfP06804 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
TnfP06804 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TnfP06804 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TnfP06804 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
TnfP06804 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TnfP06804 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TnfP06804 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TnfP06804 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.3■□□□□ 0.68
TnfP06804 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TnfP06804 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TnfP06804 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TnfP06804 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TnfP06804 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TnfP06804 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.29■□□□□ 0.68
TnfP06804 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TnfP06804 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TnfP06804 Gm15375-201ENSMUST00000119510 849 ntBASIC19.29■□□□□ 0.68
TnfP06804 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TnfP06804 Mir6982-201ENSMUST00000184354 68 ntBASIC19.29■□□□□ 0.68
TnfP06804 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TnfP06804 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TnfP06804 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TnfP06804 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TnfP06804 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TnfP06804 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TnfP06804 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.28■□□□□ 0.68
TnfP06804 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Mir1199-201ENSMUST00000117015 119 ntBASIC19.28■□□□□ 0.68
TnfP06804 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.28■□□□□ 0.68
TnfP06804 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.28■□□□□ 0.68
TnfP06804 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.28■□□□□ 0.68
TnfP06804 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnfP06804 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.28■□□□□ 0.68
TnfP06804 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.27■□□□□ 0.68
TnfP06804 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TnfP06804 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.27■□□□□ 0.68
TnfP06804 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TnfP06804 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TnfP06804 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TnfP06804 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.27■□□□□ 0.68
TnfP06804 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.27■□□□□ 0.68
TnfP06804 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TnfP06804 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TnfP06804 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TnfP06804 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.27■□□□□ 0.68
TnfP06804 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.27■□□□□ 0.68
TnfP06804 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
TnfP06804 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TnfP06804 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TnfP06804 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TnfP06804 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TnfP06804 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TnfP06804 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.26■□□□□ 0.67
TnfP06804 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TnfP06804 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.26■□□□□ 0.67
TnfP06804 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.26■□□□□ 0.67
TnfP06804 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TnfP06804 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TnfP06804 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TnfP06804 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.26■□□□□ 0.67
TnfP06804 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms