Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.19■□□□□ 0.34
Matn4O89029 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.19■□□□□ 0.34
Matn4O89029 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.19■□□□□ 0.34
Matn4O89029 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Matn4O89029 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.19■□□□□ 0.34
Matn4O89029 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn4O89029 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Matn4O89029 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.18■□□□□ 0.34
Matn4O89029 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.18■□□□□ 0.34
Matn4O89029 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.18■□□□□ 0.34
Matn4O89029 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Matn4O89029 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.18■□□□□ 0.34
Matn4O89029 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.18■□□□□ 0.34
Matn4O89029 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Matn4O89029 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Matn4O89029 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn4O89029 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Matn4O89029 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Matn4O89029 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.17■□□□□ 0.34
Matn4O89029 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Matn4O89029 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Matn4O89029 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Matn4O89029 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Matn4O89029 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Matn4O89029 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn4O89029 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Matn4O89029 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Matn4O89029 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn4O89029 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn4O89029 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.16■□□□□ 0.34
Matn4O89029 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn4O89029 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn4O89029 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Matn4O89029 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn4O89029 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.15■□□□□ 0.34
Matn4O89029 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn4O89029 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Matn4O89029 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn4O89029 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn4O89029 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn4O89029 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Matn4O89029 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Matn4O89029 Reep4-203ENSMUST00000226563 1444 ntBASIC17.14■□□□□ 0.33
Matn4O89029 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Matn4O89029 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.14■□□□□ 0.33
Matn4O89029 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.14■□□□□ 0.33
Matn4O89029 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Matn4O89029 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms