Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Abcd4O89016 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Abcd4O89016 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.43■□□□□ 0.22
Abcd4O89016 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Abcd4O89016 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Gm2559-201ENSMUST00000201323 363 ntBASIC16.43■□□□□ 0.22
Abcd4O89016 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcd4O89016 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.43■□□□□ 0.22
Abcd4O89016 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Abcd4O89016 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Abcd4O89016 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.42■□□□□ 0.22
Abcd4O89016 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.42■□□□□ 0.22
Abcd4O89016 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Abcd4O89016 Gm12896-201ENSMUST00000118430 226 ntBASIC16.42■□□□□ 0.22
Abcd4O89016 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.42■□□□□ 0.22
Abcd4O89016 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Abcd4O89016 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.42■□□□□ 0.22
Abcd4O89016 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Abcd4O89016 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcd4O89016 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Abcd4O89016 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Abcd4O89016 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcd4O89016 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Abcd4O89016 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcd4O89016 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcd4O89016 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Abcd4O89016 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
Abcd4O89016 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcd4O89016 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcd4O89016 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Abcd4O89016 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcd4O89016 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcd4O89016 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.4■□□□□ 0.22
Abcd4O89016 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Gm27275-201ENSMUST00000184318 272 ntBASIC16.4■□□□□ 0.22
Abcd4O89016 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcd4O89016 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.4■□□□□ 0.22
Abcd4O89016 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Abcd4O89016 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Abcd4O89016 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.39■□□□□ 0.21
Abcd4O89016 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcd4O89016 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.39■□□□□ 0.21
Abcd4O89016 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms