Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1hO88427 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacna1hO88427 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1hO88427 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacna1hO88427 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1hO88427 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1hO88427 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.78■□□□□ 0.44
Cacna1hO88427 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1hO88427 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1hO88427 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.77■□□□□ 0.44
Cacna1hO88427 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 Gm11950-201ENSMUST00000121615 838 ntBASIC17.77■□□□□ 0.44
Cacna1hO88427 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.77■□□□□ 0.44
Cacna1hO88427 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1hO88427 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cacna1hO88427 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cacna1hO88427 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cacna1hO88427 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cacna1hO88427 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cacna1hO88427 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cacna1hO88427 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cacna1hO88427 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.76■□□□□ 0.43
Cacna1hO88427 Gm27742-201ENSMUST00000184667 60 ntBASIC17.76■□□□□ 0.43
Cacna1hO88427 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.76■□□□□ 0.43
Cacna1hO88427 Gm43347-201ENSMUST00000200226 580 ntBASIC17.76■□□□□ 0.43
Cacna1hO88427 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.76■□□□□ 0.43
Cacna1hO88427 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1hO88427 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Gm18195-201ENSMUST00000207604 706 ntBASIC17.75■□□□□ 0.43
Cacna1hO88427 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Olfr129-201ENSMUST00000122318 993 ntBASIC17.75■□□□□ 0.43
Cacna1hO88427 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.75■□□□□ 0.43
Cacna1hO88427 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1hO88427 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.74■□□□□ 0.43
Cacna1hO88427 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.74■□□□□ 0.43
Cacna1hO88427 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1hO88427 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.73■□□□□ 0.43
Cacna1hO88427 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Cacna1hO88427 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.73■□□□□ 0.43
Cacna1hO88427 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cacna1hO88427 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1hO88427 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1hO88427 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1hO88427 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1hO88427 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cacna1hO88427 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cacna1hO88427 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.72■□□□□ 0.43
Cacna1hO88427 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1hO88427 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cacna1hO88427 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms