Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IkbkbO88351 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IkbkbO88351 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
IkbkbO88351 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IkbkbO88351 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IkbkbO88351 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IkbkbO88351 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IkbkbO88351 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IkbkbO88351 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IkbkbO88351 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.1■□□□□ 0.81
IkbkbO88351 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
IkbkbO88351 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.09■□□□□ 0.81
IkbkbO88351 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.09■□□□□ 0.81
IkbkbO88351 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
IkbkbO88351 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.09■□□□□ 0.81
IkbkbO88351 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
IkbkbO88351 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
IkbkbO88351 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IkbkbO88351 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IkbkbO88351 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
IkbkbO88351 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
IkbkbO88351 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IkbkbO88351 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.08■□□□□ 0.81
IkbkbO88351 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.08■□□□□ 0.81
IkbkbO88351 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.08■□□□□ 0.81
IkbkbO88351 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.08■□□□□ 0.81
IkbkbO88351 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IkbkbO88351 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IkbkbO88351 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IkbkbO88351 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.08■□□□□ 0.8
IkbkbO88351 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IkbkbO88351 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IkbkbO88351 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
IkbkbO88351 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
IkbkbO88351 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IkbkbO88351 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Gm26524-201ENSMUST00000192339 390 ntBASIC20.07■□□□□ 0.8
IkbkbO88351 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
IkbkbO88351 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.07■□□□□ 0.8
IkbkbO88351 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
IkbkbO88351 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
IkbkbO88351 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IkbkbO88351 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IkbkbO88351 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IkbkbO88351 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IkbkbO88351 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.06■□□□□ 0.8
IkbkbO88351 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IkbkbO88351 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IkbkbO88351 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IkbkbO88351 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
IkbkbO88351 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IkbkbO88351 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
IkbkbO88351 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
IkbkbO88351 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.06■□□□□ 0.8
IkbkbO88351 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.06■□□□□ 0.8
IkbkbO88351 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
IkbkbO88351 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IkbkbO88351 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.05■□□□□ 0.8
IkbkbO88351 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
IkbkbO88351 Gm12527-201ENSMUST00000117967 564 ntBASIC20.05■□□□□ 0.8
IkbkbO88351 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Gm10653-202ENSMUST00000139570 835 ntBASIC20.05■□□□□ 0.8
IkbkbO88351 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.05■□□□□ 0.8
IkbkbO88351 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
IkbkbO88351 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IkbkbO88351 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IkbkbO88351 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IkbkbO88351 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IkbkbO88351 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IkbkbO88351 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IkbkbO88351 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.04■□□□□ 0.8
IkbkbO88351 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms