Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prom1O54990 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prom1O54990 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.15■□□□□ 0.82
Prom1O54990 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prom1O54990 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prom1O54990 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prom1O54990 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.15■□□□□ 0.82
Prom1O54990 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prom1O54990 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prom1O54990 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.15■□□□□ 0.82
Prom1O54990 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Prom1O54990 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prom1O54990 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Prom1O54990 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Prom1O54990 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prom1O54990 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prom1O54990 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prom1O54990 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.14■□□□□ 0.81
Prom1O54990 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.14■□□□□ 0.81
Prom1O54990 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prom1O54990 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prom1O54990 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prom1O54990 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.13■□□□□ 0.81
Prom1O54990 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Prom1O54990 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Prom1O54990 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.13■□□□□ 0.81
Prom1O54990 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Prom1O54990 Gm13559-201ENSMUST00000120476 863 ntBASIC20.13■□□□□ 0.81
Prom1O54990 Gm12382-201ENSMUST00000122005 922 ntBASIC20.13■□□□□ 0.81
Prom1O54990 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.13■□□□□ 0.81
Prom1O54990 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Prom1O54990 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Prom1O54990 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Prom1O54990 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prom1O54990 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prom1O54990 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.12■□□□□ 0.81
Prom1O54990 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.12■□□□□ 0.81
Prom1O54990 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Gm3375-201ENSMUST00000203929 796 ntBASIC20.12■□□□□ 0.81
Prom1O54990 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prom1O54990 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prom1O54990 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prom1O54990 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prom1O54990 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prom1O54990 Gm7889-201ENSMUST00000185591 958 ntBASIC20.11■□□□□ 0.81
Prom1O54990 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prom1O54990 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Prom1O54990 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prom1O54990 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.11■□□□□ 0.81
Prom1O54990 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prom1O54990 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prom1O54990 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.1■□□□□ 0.81
Prom1O54990 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prom1O54990 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prom1O54990 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Prom1O54990 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Prom1O54990 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prom1O54990 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Prom1O54990 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prom1O54990 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.1■□□□□ 0.81
Prom1O54990 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prom1O54990 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prom1O54990 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prom1O54990 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.09■□□□□ 0.81
Prom1O54990 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.09■□□□□ 0.81
Prom1O54990 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prom1O54990 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prom1O54990 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prom1O54990 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Prom1O54990 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.08■□□□□ 0.81
Prom1O54990 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.08■□□□□ 0.81
Prom1O54990 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Prom1O54990 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Prom1O54990 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prom1O54990 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prom1O54990 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prom1O54990 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prom1O54990 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prom1O54990 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms