Protein–RNA interactions for Protein: O35902

Dsg3, Desmoglein-3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg3O35902 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg3O35902 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.42■□□□□ 0.7
Dsg3O35902 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg3O35902 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Dsg3O35902 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg3O35902 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Dsg3O35902 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg3O35902 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
Dsg3O35902 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg3O35902 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg3O35902 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg3O35902 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Dsg3O35902 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg3O35902 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.41■□□□□ 0.7
Dsg3O35902 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Dsg3O35902 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg3O35902 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg3O35902 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg3O35902 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg3O35902 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Dsg3O35902 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg3O35902 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Dsg3O35902 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Dsg3O35902 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg3O35902 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg3O35902 Flg-201ENSMUST00000050758 1488 ntBASIC19.4■□□□□ 0.7
Dsg3O35902 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg3O35902 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Dsg3O35902 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg3O35902 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg3O35902 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Dsg3O35902 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg3O35902 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg3O35902 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg3O35902 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg3O35902 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.38■□□□□ 0.69
Dsg3O35902 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Dsg3O35902 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.38■□□□□ 0.69
Dsg3O35902 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Dsg3O35902 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg3O35902 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.38■□□□□ 0.69
Dsg3O35902 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.37■□□□□ 0.69
Dsg3O35902 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Dsg3O35902 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Dsg3O35902 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.37■□□□□ 0.69
Dsg3O35902 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.37■□□□□ 0.69
Dsg3O35902 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg3O35902 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Dsg3O35902 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.36■□□□□ 0.69
Dsg3O35902 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.36■□□□□ 0.69
Dsg3O35902 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Dsg3O35902 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.36■□□□□ 0.69
Dsg3O35902 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.36■□□□□ 0.69
Dsg3O35902 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Dsg3O35902 Mtag2-201ENSMUST00000058665 714 ntBASIC19.36■□□□□ 0.69
Dsg3O35902 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.36■□□□□ 0.69
Dsg3O35902 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Dsg3O35902 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dsg3O35902 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dsg3O35902 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dsg3O35902 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms