Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Matn3O35701 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.5■□□□□ 0.23
Matn3O35701 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.5■□□□□ 0.23
Matn3O35701 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Matn3O35701 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.5■□□□□ 0.23
Matn3O35701 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Matn3O35701 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Matn3O35701 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Matn3O35701 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Matn3O35701 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.49■□□□□ 0.23
Matn3O35701 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Matn3O35701 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Matn3O35701 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Gm12821-201ENSMUST00000120022 600 ntBASIC16.49■□□□□ 0.23
Matn3O35701 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.49■□□□□ 0.23
Matn3O35701 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.49■□□□□ 0.23
Matn3O35701 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.49■□□□□ 0.23
Matn3O35701 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Matn3O35701 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.49■□□□□ 0.23
Matn3O35701 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Matn3O35701 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.48■□□□□ 0.23
Matn3O35701 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Matn3O35701 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Matn3O35701 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Matn3O35701 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.48■□□□□ 0.23
Matn3O35701 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Matn3O35701 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Matn3O35701 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Matn3O35701 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Matn3O35701 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Matn3O35701 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Matn3O35701 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.47■□□□□ 0.23
Matn3O35701 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.47■□□□□ 0.23
Matn3O35701 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.47■□□□□ 0.23
Matn3O35701 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.47■□□□□ 0.23
Matn3O35701 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Matn3O35701 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Matn3O35701 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Matn3O35701 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.46■□□□□ 0.23
Matn3O35701 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms