Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stag2O35638 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Stag2O35638 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 Gm38285-201ENSMUST00000192928 922 ntBASIC20.86■□□□□ 0.93
Stag2O35638 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.86■□□□□ 0.93
Stag2O35638 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.86■□□□□ 0.93
Stag2O35638 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Stag2O35638 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stag2O35638 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.85■□□□□ 0.93
Stag2O35638 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stag2O35638 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Stag2O35638 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Stag2O35638 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stag2O35638 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stag2O35638 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stag2O35638 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Stag2O35638 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Stag2O35638 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stag2O35638 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stag2O35638 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.85■□□□□ 0.93
Stag2O35638 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stag2O35638 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Stag2O35638 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.84■□□□□ 0.93
Stag2O35638 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stag2O35638 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Stag2O35638 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stag2O35638 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stag2O35638 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Stag2O35638 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.83■□□□□ 0.93
Stag2O35638 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Stag2O35638 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stag2O35638 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stag2O35638 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stag2O35638 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Stag2O35638 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stag2O35638 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stag2O35638 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.82■□□□□ 0.92
Stag2O35638 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stag2O35638 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.82■□□□□ 0.92
Stag2O35638 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.82■□□□□ 0.92
Stag2O35638 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stag2O35638 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stag2O35638 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Stag2O35638 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stag2O35638 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.81■□□□□ 0.92
Stag2O35638 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.81■□□□□ 0.92
Stag2O35638 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.81■□□□□ 0.92
Stag2O35638 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Stag2O35638 Gm13158-201ENSMUST00000122007 736 ntBASIC20.81■□□□□ 0.92
Stag2O35638 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stag2O35638 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stag2O35638 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stag2O35638 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Stag2O35638 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stag2O35638 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Stag2O35638 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Stag2O35638 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.8■□□□□ 0.92
Stag2O35638 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.8■□□□□ 0.92
Stag2O35638 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.8■□□□□ 0.92
Stag2O35638 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Gm10698-201ENSMUST00000182663 604 ntBASIC20.8■□□□□ 0.92
Stag2O35638 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Stag2O35638 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag2O35638 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Stag2O35638 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Stag2O35638 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag2O35638 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag2O35638 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag2O35638 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.79■□□□□ 0.92
Stag2O35638 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stag2O35638 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag2O35638 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms