Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Clk4O35493 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clk4O35493 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clk4O35493 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clk4O35493 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clk4O35493 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clk4O35493 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clk4O35493 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk4O35493 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clk4O35493 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clk4O35493 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Clk4O35493 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clk4O35493 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.41■□□□□ 0.38
Clk4O35493 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clk4O35493 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.41■□□□□ 0.38
Clk4O35493 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clk4O35493 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk4O35493 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.4■□□□□ 0.38
Clk4O35493 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Clk4O35493 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Clk4O35493 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Clk4O35493 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk4O35493 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.39■□□□□ 0.38
Clk4O35493 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clk4O35493 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk4O35493 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clk4O35493 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk4O35493 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Clk4O35493 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clk4O35493 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.39■□□□□ 0.37
Clk4O35493 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.39■□□□□ 0.37
Clk4O35493 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.39■□□□□ 0.37
Clk4O35493 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.39■□□□□ 0.37
Clk4O35493 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clk4O35493 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk4O35493 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clk4O35493 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk4O35493 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.39■□□□□ 0.37
Clk4O35493 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk4O35493 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk4O35493 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk4O35493 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.38■□□□□ 0.37
Clk4O35493 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk4O35493 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.38■□□□□ 0.37
Clk4O35493 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk4O35493 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
Clk4O35493 Gm13148-201ENSMUST00000118892 745 ntBASIC17.38■□□□□ 0.37
Clk4O35493 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk4O35493 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk4O35493 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk4O35493 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk4O35493 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms