Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hps1O08983 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hps1O08983 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hps1O08983 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hps1O08983 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hps1O08983 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hps1O08983 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hps1O08983 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hps1O08983 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Hps1O08983 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hps1O08983 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.84■□□□□ 0.29
Hps1O08983 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hps1O08983 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.84■□□□□ 0.29
Hps1O08983 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hps1O08983 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.84■□□□□ 0.29
Hps1O08983 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Hps1O08983 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Hps1O08983 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hps1O08983 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hps1O08983 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.83■□□□□ 0.28
Hps1O08983 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.83■□□□□ 0.28
Hps1O08983 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hps1O08983 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hps1O08983 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hps1O08983 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hps1O08983 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hps1O08983 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hps1O08983 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hps1O08983 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hps1O08983 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hps1O08983 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.82■□□□□ 0.28
Hps1O08983 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.82■□□□□ 0.28
Hps1O08983 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.82■□□□□ 0.28
Hps1O08983 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.82■□□□□ 0.28
Hps1O08983 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hps1O08983 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hps1O08983 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.81■□□□□ 0.28
Hps1O08983 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.81■□□□□ 0.28
Hps1O08983 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hps1O08983 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hps1O08983 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.81■□□□□ 0.28
Hps1O08983 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hps1O08983 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hps1O08983 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Gm12933-201ENSMUST00000120203 872 ntBASIC16.8■□□□□ 0.28
Hps1O08983 Gm11421-201ENSMUST00000122124 294 ntBASIC16.8■□□□□ 0.28
Hps1O08983 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.8■□□□□ 0.28
Hps1O08983 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hps1O08983 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms