Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1cO08604 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Raet1cO08604 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.23■□□□□ 0.19
Raet1cO08604 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.23■□□□□ 0.19
Raet1cO08604 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.23■□□□□ 0.19
Raet1cO08604 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1cO08604 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raet1cO08604 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raet1cO08604 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.22■□□□□ 0.19
Raet1cO08604 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Raet1cO08604 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raet1cO08604 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Raet1cO08604 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.22■□□□□ 0.19
Raet1cO08604 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Raet1cO08604 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raet1cO08604 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Raet1cO08604 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Raet1cO08604 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Raet1cO08604 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.21■□□□□ 0.19
Raet1cO08604 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.21■□□□□ 0.19
Raet1cO08604 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Raet1cO08604 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Raet1cO08604 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Raet1cO08604 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Raet1cO08604 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Raet1cO08604 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.2■□□□□ 0.18
Raet1cO08604 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Gm6365-201ENSMUST00000054711 744 ntBASIC16.2■□□□□ 0.18
Raet1cO08604 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Raet1cO08604 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raet1cO08604 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raet1cO08604 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.19■□□□□ 0.18
Raet1cO08604 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raet1cO08604 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Raet1cO08604 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.19■□□□□ 0.18
Raet1cO08604 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Raet1cO08604 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Raet1cO08604 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.19■□□□□ 0.18
Raet1cO08604 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.19■□□□□ 0.18
Raet1cO08604 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.19■□□□□ 0.18
Raet1cO08604 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raet1cO08604 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raet1cO08604 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Raet1cO08604 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.19■□□□□ 0.18
Raet1cO08604 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Raet1cO08604 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Raet1cO08604 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Raet1cO08604 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raet1cO08604 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raet1cO08604 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Raet1cO08604 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1cO08604 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Raet1cO08604 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1cO08604 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1cO08604 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1cO08604 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.18■□□□□ 0.18
Raet1cO08604 Gm27405-201ENSMUST00000184201 112 ntBASIC16.18■□□□□ 0.18
Raet1cO08604 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Raet1cO08604 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Raet1cO08604 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1cO08604 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1cO08604 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1cO08604 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1cO08604 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Raet1cO08604 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1cO08604 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Raet1cO08604 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1cO08604 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1cO08604 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1cO08604 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms