Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shisa8J3QNX5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shisa8J3QNX5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Shisa8J3QNX5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shisa8J3QNX5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shisa8J3QNX5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Gm27801-201ENSMUST00000184174 223 ntBASIC16.56■□□□□ 0.24
Shisa8J3QNX5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Shisa8J3QNX5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Shisa8J3QNX5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Gm9847-201ENSMUST00000052528 599 ntBASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shisa8J3QNX5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms