Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.68■□□□□ 0.58
Atf6F6VAN0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6F6VAN0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.66■□□□□ 0.58
Atf6F6VAN0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Gm6365-201ENSMUST00000054711 744 ntBASIC18.66■□□□□ 0.58
Atf6F6VAN0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6F6VAN0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.65■□□□□ 0.58
Atf6F6VAN0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6F6VAN0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6F6VAN0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6F6VAN0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.64■□□□□ 0.57
Atf6F6VAN0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.64■□□□□ 0.57
Atf6F6VAN0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.64■□□□□ 0.57
Atf6F6VAN0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.63■□□□□ 0.57
Atf6F6VAN0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Rarb-207ENSMUST00000225921 2756 ntBASIC18.63■□□□□ 0.57
Atf6F6VAN0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6F6VAN0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Gm27405-201ENSMUST00000184201 112 ntBASIC18.62■□□□□ 0.57
Atf6F6VAN0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.62■□□□□ 0.57
Atf6F6VAN0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.62■□□□□ 0.57
Atf6F6VAN0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms