Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54bE9PXC0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54bE9PXC0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Gm15375-201ENSMUST00000119510 849 ntBASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Srp54bE9PXC0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54bE9PXC0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.84■□□□□ 0.45
Srp54bE9PXC0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Gm15565-201ENSMUST00000118890 427 ntBASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Gm43183-201ENSMUST00000200632 547 ntBASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54bE9PXC0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Srp54bE9PXC0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Srp54bE9PXC0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Srp54bE9PXC0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Srp54bE9PXC0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Srp54bE9PXC0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Srp54bE9PXC0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Gm18025-201ENSMUST00000221733 862 ntBASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.83■□□□□ 0.44
Srp54bE9PXC0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.82■□□□□ 0.44
Srp54bE9PXC0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srp54bE9PXC0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Srp54bE9PXC0 Gm13836-201ENSMUST00000121159 501 ntBASIC17.82■□□□□ 0.44
Srp54bE9PXC0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.82■□□□□ 0.44
Srp54bE9PXC0 Mir5122-201ENSMUST00000175004 89 ntBASIC17.82■□□□□ 0.44
Srp54bE9PXC0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srp54bE9PXC0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 417.5 ms