Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd3B1AR17 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd3B1AR17 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd3B1AR17 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chd3B1AR17 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.86■□□□□ 0.45
Chd3B1AR17 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd3B1AR17 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.86■□□□□ 0.45
Chd3B1AR17 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.86■□□□□ 0.45
Chd3B1AR17 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chd3B1AR17 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chd3B1AR17 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.86■□□□□ 0.45
Chd3B1AR17 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.86■□□□□ 0.45
Chd3B1AR17 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd3B1AR17 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd3B1AR17 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd3B1AR17 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd3B1AR17 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd3B1AR17 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd3B1AR17 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.85■□□□□ 0.45
Chd3B1AR17 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd3B1AR17 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chd3B1AR17 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chd3B1AR17 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.84■□□□□ 0.45
Chd3B1AR17 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chd3B1AR17 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chd3B1AR17 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.84■□□□□ 0.45
Chd3B1AR17 Gm6576-201ENSMUST00000169678 883 ntBASIC17.84■□□□□ 0.45
Chd3B1AR17 Gm37055-201ENSMUST00000191866 133 ntBASIC17.84■□□□□ 0.45
Chd3B1AR17 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd3B1AR17 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chd3B1AR17 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Chd3B1AR17 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd3B1AR17 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd3B1AR17 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd3B1AR17 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd3B1AR17 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd3B1AR17 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd3B1AR17 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Chd3B1AR17 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Chd3B1AR17 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd3B1AR17 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd3B1AR17 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Chd3B1AR17 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd3B1AR17 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Chd3B1AR17 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd3B1AR17 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd3B1AR17 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd3B1AR17 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd3B1AR17 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd3B1AR17 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd3B1AR17 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd3B1AR17 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd3B1AR17 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd3B1AR17 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd3B1AR17 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd3B1AR17 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.81■□□□□ 0.44
Chd3B1AR17 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chd3B1AR17 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd3B1AR17 Gm38285-201ENSMUST00000192928 922 ntBASIC17.81■□□□□ 0.44
Chd3B1AR17 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd3B1AR17 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chd3B1AR17 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd3B1AR17 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.81■□□□□ 0.44
Chd3B1AR17 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Chd3B1AR17 Gm15375-201ENSMUST00000119510 849 ntBASIC17.81■□□□□ 0.44
Chd3B1AR17 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chd3B1AR17 Gm18666-201ENSMUST00000190039 958 ntBASIC17.81■□□□□ 0.44
Chd3B1AR17 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd3B1AR17 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd3B1AR17 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd3B1AR17 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd3B1AR17 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd3B1AR17 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chd3B1AR17 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chd3B1AR17 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chd3B1AR17 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd3B1AR17 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd3B1AR17 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Chd3B1AR17 Mir6982-201ENSMUST00000184354 68 ntBASIC17.79■□□□□ 0.44
Chd3B1AR17 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd3B1AR17 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd3B1AR17 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms