Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a5A6H584 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a5A6H584 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.8□□□□□ -0.2
Col6a5A6H584 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.8□□□□□ -0.2
Col6a5A6H584 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a5A6H584 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a5A6H584 Gm13474-201ENSMUST00000122466 815 ntBASIC13.8□□□□□ -0.2
Col6a5A6H584 Gm18195-201ENSMUST00000207604 706 ntBASIC13.8□□□□□ -0.2
Col6a5A6H584 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col6a5A6H584 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a5A6H584 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a5A6H584 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.8□□□□□ -0.2
Col6a5A6H584 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a5A6H584 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.79□□□□□ -0.2
Col6a5A6H584 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.79□□□□□ -0.2
Col6a5A6H584 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.79□□□□□ -0.2
Col6a5A6H584 Gm27742-201ENSMUST00000184667 60 ntBASIC13.79□□□□□ -0.2
Col6a5A6H584 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.79□□□□□ -0.2
Col6a5A6H584 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col6a5A6H584 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.79□□□□□ -0.2
Col6a5A6H584 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC13.79□□□□□ -0.2
Col6a5A6H584 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a5A6H584 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col6a5A6H584 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col6a5A6H584 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col6a5A6H584 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Col6a5A6H584 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col6a5A6H584 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col6a5A6H584 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a5A6H584 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a5A6H584 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.77□□□□□ -0.2
Col6a5A6H584 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a5A6H584 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a5A6H584 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Col6a5A6H584 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.77□□□□□ -0.21
Col6a5A6H584 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Col6a5A6H584 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Col6a5A6H584 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Col6a5A6H584 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col6a5A6H584 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Col6a5A6H584 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col6a5A6H584 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a5A6H584 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col6a5A6H584 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.76□□□□□ -0.21
Col6a5A6H584 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a5A6H584 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Col6a5A6H584 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.75□□□□□ -0.21
Col6a5A6H584 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.75□□□□□ -0.21
Col6a5A6H584 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Mir1668-201ENSMUST00000184114 107 ntBASIC13.75□□□□□ -0.21
Col6a5A6H584 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms