Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Spcs1-204ENSMUST00000226782 949 ntBASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv1-88A0A140T8N1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm9847-201ENSMUST00000052528 599 ntBASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv1-88A0A140T8N1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv1-88A0A140T8N1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv1-88A0A140T8N1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv1-88A0A140T8N1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv1-88A0A140T8N1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12□□□□□ -0.49
Igkv1-88A0A140T8N1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms