Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap99A0A140LIX9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap99A0A140LIX9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cfap99A0A140LIX9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cfap99A0A140LIX9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cfap99A0A140LIX9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Cfap99A0A140LIX9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.72■■□□□ 1.07
Cfap99A0A140LIX9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cfap99A0A140LIX9 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.72■■□□□ 1.07
Cfap99A0A140LIX9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cfap99A0A140LIX9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Gm11249-201ENSMUST00000117071 859 ntBASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.71■■□□□ 1.07
Cfap99A0A140LIX9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Gm715-201ENSMUST00000117865 831 ntBASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap99A0A140LIX9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap99A0A140LIX9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cfap99A0A140LIX9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cfap99A0A140LIX9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms