Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv29A0A0G2LB96 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.14■□□□□ 0.01
Trbv29A0A0G2LB96 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv29A0A0G2LB96 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv29A0A0G2LB96 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv29A0A0G2LB96 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv29A0A0G2LB96 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Tgds-204ENSMUST00000228543 1594 ntBASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv29A0A0G2LB96 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv29A0A0G2LB96 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Trbv29A0A0G2LB96 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trbv29A0A0G2LB96 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv29A0A0G2LB96 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Gm43017-201ENSMUST00000198296 752 ntBASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.08■□□□□ 0
Trbv29A0A0G2LB96 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms