Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm22325-201ENSMUST00000158904 308 ntBASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42778-201ENSMUST00000199644 553 ntBASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms