Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9d-4A0A0G2JG37 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Rps24-207ENSMUST00000224568 714 ntBASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-4A0A0G2JG37 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
Trav9d-4A0A0G2JG37 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9d-4A0A0G2JG37 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav9d-4A0A0G2JG37 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9d-4A0A0G2JG37 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9d-4A0A0G2JG37 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms